From Human Salivary Proteome Wiki

ClustalW is a general purpose multiple sequence alignment program for DNA or proteins. It produces biologically meaningful multiple sequence alignments of divergent sequences. It calculates the best match for the selected sequences, and lines them up so that the identities, similarities and differences can be seen. This service is provided by the European Bioinformatics Institute (EBI).

Sequence Alignment Options: Protein Weight Matrix: GonnetBLOSUMPAMID Gap Open: 10100502552 Gap Extension: 10100502552 Gap Distance: 51098764321 No End Gaps: noyes Iteration: nonetreealignment Num Iter: 12345678910 Clustering: NJUPGMA Enter one sequence page name (e.g. HSPW:PDDBCB3/1) or amino acid sequence per line for each sequence to be aligned:

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